Version 5.4
Bos taurus Gene: SCUBE1
Summary
InnateDB Gene IDBG-642163.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SCUBE1
Gene Name Uncharacterized protein
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000011275
Encoded Proteins
IDBP-694588
signal peptide, CUB domain, EGF-like 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000159307:
This gene encodes a cell surface glycoprotein that is a member of the SCUBE (signal peptide, CUB domain, EGF (epidermal growth factor)-like protein) family. Family members have an amino-terminal signal peptide, nine copies of EGF-like repeats and a CUB domain at the carboxyl terminus. This protein is expressed in platelets and endothelial cells and may play an important role in vascular biology. [provided by RefSeq, Oct 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:114644629-114767260
Strand Reverse strand
Band
Transcripts
ENSBTAT00000037639 ENSBTAP00000037465
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
GO:0005515 protein binding
GO:0042802 identical protein binding
GO:0046982 protein heterodimerization activity
Biological Process
GO:0051260 protein homooligomerization
Cellular Component
GO:0005615 extracellular space
GO:0009897 external side of plasma membrane
GO:0009986 cell surface
GO:0019897 extrinsic component of plasma membrane
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000159307
View Gene Order
ENSMUSG00000016763
View Gene Order
Cross-References
SwissProt
TrEMBL F1MJF1
UniProt Splice Variant
Entrez Gene
UniGene Bt.112086 Bt.112260
RefSeq
HUGO HGNC:13441
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02014852 DAAA02014853 DAAA02014854 DAAA02014855
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca